Systems Engineer II
Apollo Professional Solutions
Systems Engineer II Location: Pleasanton, CA (Onsite) Schedule: Monday-Friday | 9:00 AM - 6:00 PM (flexibility required based on business needs) Employment Type: Contract Drive Innovation in Next-Generation Diagnostic Systems We are seeking an experienced Systems Engineer II to support the integration and development of advanced diagnostic technologies. This position offers the opportunity to work across multidisciplinary teams, helping bring together complex systems that include instrumentation, software, molecular diagnostics, and data processing solutions. The ideal candidate is a hands‑on systems engineer with a passion for solving challenging technical problems, optimizing end‑to‑end workflows, and collaborating across engineering and scientific disciplines to deliver scalable, high‑performing solutions. What You’ll Do Supporting end‑to‑end system integration activities across instruments, software applications, workflows, and data processing pipelines. Collaborating with cross-functional teams including software, hardware, assay development, and bioinformatics experts. Contributing to system requirements development, defect tracking, and system-level testing efforts. Designing and executing verification and validation (V&V) test plans to ensure requirements are fully covered and met. Evaluating and analyzing test results for accuracy, compliance, and overall system performance. Identifying, documenting, troubleshooting, and resolving system issues through structured root cause analysis. Developing and maintaining technical documentation, including system requirements, specifications, integration strategies, test protocols, and verification reports. Driving workflow improvements, process simplification, automation initiatives, and continuous improvement activities to enhance efficiency and scalability. Supporting the development and optimization of integrated diagnostic workflows involving sample preparation, library preparation, molecular detection technologies, and data analysis systems. Required Qualifications Bachelor's degree in Systems Engineering, Software Engineering, Biomedical Engineering, or a related technical discipline. Minimum of 5 years of relevant industry experience in systems engineering, system integration, product development, or related technical environments. Demonstrated experience troubleshooting both software and instrument-related issues. Strong analytical thinking and problem-solving abilities with the capability to work independently. Excellent verbal and written communication skills with the ability to collaborate and influence cross-functional stakeholders. Ability to manage multiple priorities in a dynamic, fast-paced environment. Preferred Qualifications Advanced degree in a related engineering or scientific field. Experience working with cloud-based platforms and systems. Experience supporting the development of in vitro diagnostic (IVD) products. Familiarity with molecular diagnostic technologies such as qPCR, digital PCR, sequencing, or related workflows. Programming or scripting experience in languages such as Python or Java. Exposure to bioinformatics workflows, data pipelines, or diagnostic software systems. Who You Are You are a curious and collaborative engineer who thrives at the intersection of technology, science, and data. You enjoy transforming complex workflows into reliable, scalable system solutions and are motivated by solving challenging technical problems. As a fast learner and strong individual contributor, you can work across diverse teams while helping drive innovation, quality, and operational excellence. Why Consider This Opportunity? This role offers valuable experience in systems integration, diagnostic technologies, software and hardware validation, root cause analysis, verification and validation testing, cloud-based systems, bioinformatics workflows, and advanced product development. You’ll partner with highly skilled teams while contributing to cutting‑edge technologies that support the future of diagnostics. Keywords: Systems Engineer II, System Integration Engineer, Biomedical Engineering Jobs, Software Engineering Jobs, Diagnostic Systems, Verification and Validation, V&V Testing, Root Cause Analysis, Product Development, Cloud Computing, Python, Java, Molecular Diagnostics, Bioinformatics, Pleasanton CA Jobs, Contract Engineering Jobs. #J-18808-Ljbffr
- ...Job Description Systems Engineer II Location: Pleasanton, CA (Onsite) Schedule: Monday-Friday | 9:00 AM - 6:00 PM (flexibility required based on business needs) Employment Type: Contract Drive Innovation in Next-Generation Diagnostic Systems We are...SuggestedContract workMonday to Friday
- Title: Systems Engineer II Description: Description: Interview process: 1. phone 2 in-person interview Position Summary We are seeking a highly motivated Senior System Engineer to join our End-to-End Solution Integration Chapter supporting Next-Generation Diagnostic Solutions...SuggestedFlexible hours
- Apollo Professional Solutions, Inc. in Pleasanton, CA is seeking a Systems Engineer II for a onsite contract role. You will support integration of diagnostic technologies across instrumentation, software, and data processing systems. The ideal candidate has a Bachelor's...SuggestedContract work
- ...Job Description Job Description System Performance Engineer I/II – Northern California Communication Technology Services (CTS ) is one of the largest integrators and managed service providers for enterprise cellular networks in the U.S., specializing in the design...SuggestedFull timeWork experience placementWork at officeNight shift
- The Fountain Group seeks a Senior System Engineer for an onsite role in Pleasanton, CA. You will support feasibility, development, and integration of complex multidisciplinary systems spanning sample preparation, library preparation, molecular detection technologies, and...Suggested
- ...Systems Engineer IILocation: Onsite; Fremont, CA Duration: 12+ monthsThe Systems Engineer owns the success of specific dataset collections where external participants are brought into the collection space to go through specific capture protocols. This role is accountable...
- Title: Systems Engineer Location: Pleasanton, CA Duration: 12 Months 100% Onsite Shift Time: 8am to 5pm Job Summary: The Systems Engineer is... ...processes Experience supporting regulatory submissions for Class II/III medical devices Job Responsibilities: Lead system...Temporary workFor contractorsFlexible hoursShift work
- Job Description Job Description ** Title: SYSTEMS ENGINEER - VERIFICATION ** ** Location: Bay Area, CA ** ** Duration: 1-year, possible extensions... ..., and quality-system processes. Experience supporting Class II and/or Class III medical device submissions is highly...
- ...Job Description Job Description Job Title: Systems Engineer II/vCIO Division: Managed IT Services Branch: Pleasanton, Santa Rosa and San Mateo Reports to: Managed IT Service Manager The System Engineer is responsible for the maintenance...Remote work
- Acara Solutions in Fremont, CA seeks a Mechanical Engineer II to design and analyze mechanical systems, components, and packaging solutions. You will create 3D CAD models, assemblies, and drawings, and participate in design reviews during prototype development. You will...Contract work
$146.34k - $222.56k
Associate | Full-time Engineering | Livermore, CA | 07/30/2026Reference #: REF8645JJob Code: SES.2 Science & Engineering MTS 2 / SES.3 Science... ...impact.Job DescriptionWe have multiple openings for Weapon System Engineers to support cross-functional engineering activities...Minimum wageFull timeFor contractorsLocal areaWork from homeRelocationFlexible hours1 day per week- ...relationships with multiple functions (eg., operations, maintenance, engineering) in prospect/customer organizations.Develops and employs... ...Messer refreshingly different. Our Application Sales Engineers II at Messer can expect to earn between $113,779 - $166,876.If you...Full timeContract work
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Mid-Senior Level | Full-time Engineering | Livermore, CA | 06/03/2026Reference #: REF8409QJob Code: SEL.4 Science & Engineering TSL 4Organization... ...real impact.Job DescriptionWe have an opening for a Cryogenic Systems Engineering Manager to lead and advance the cryogenic...Full timeFor contractorsRelocationFlexible hours- ...products.Collect, analyze, and develop report packages to support system verification and validations, and compile content for... ...and ability to work with minimal direction.EducationB.S. or M.S. in Engineering, Physical, and/or Biological Sciences, or related field...Flexible hours
- ...System Engineer ILocation: Pleasanton, CAOnsite position l 5 days a week. Interview: 1 phone screening 2. Onsite. May do an occasional travel to the Santa Clara jobsite for training etc.Position SummaryWe are seeking a highly motivated System Engineer to join our End-to...
- ...Job Purpose and Primary Objectives: Benchmark Space Systems is seeking a highly motivated and experienced Propulsion Systems Engineer to join our Propulsion team. This role will be responsible for full-cycle product ownership of spacecraft propulsion systems...Flexible hours
- Job-ID28152471Reference24-148901TypeContractRemote100% RemoteJob - Scanning Systems Engineer Location - Remote Must Haves:Oversee planning, design, implementation, and operation of scanning and indexing systems projects.Manage implementation of scanning and indexing systems...Remote work
- Required Qualifications 1 to 5 years of professional experience in systems engineering, IT operations, or technical support Working knowledge of Linux and or Windows Server environments Basic understanding of networking concepts such as TCP/IP, DNS, VLANs, and firewalls...
- Role: Systems Engineer Location: Pleasanton, CA Contract Duration: 12 Months Position Overview We are seeking an experienced Systems Engineer to lead system integration activities for complex, regulated medical devices. This role will support both new product development...Contract work
- AEye, Inc. in Pleasanton, CA is seeking a Senior Systems Engineer to lead lidar system development, collaborating across architecture, hardware, software, firmware, and mechanical teams. You will drive specifications, build physics-based models, and validate performance...
$140k - $180k
Linuxconfig is seeking a Senior Systems Engineer to join our team in Pleasanton, CA. The role focuses on collaborating with cross-functional teams to develop specifications for lidar technologies. Candidates should have significant experience in optoelectronic systems...$140k - $180k
We are looking for a Senior Systems Engineer to join our systems engineering team and collaborate with internal architecture, hardware, software, firmware, and mechanical teams to drive the specifications of AEye's lidar and its variants. You evaluate and characterize...Work at office$60 - $80 per hour
...do an occasional travel to the Santa Clara jobsite for training etc. Position Summary We are seeking a highly motivated Senior System Engineer to join our End-to-End Solution Integration Chapter supporting Next-Generation Diagnostic Solutions. In this hands-on role,...Contract work$60 - $80 per hour
A leading technology firm is seeking a Senior System Engineer in Pleasanton, California. In this role, you'll tackle the integration of complex systems within next-generation diagnostic solutions. You'll apply strong analytical and statistical methods while collaborating...Hourly pay- Mid-Senior Level | Full-time Engineering | Livermore, CA | 03/16/2026Reference #: REF8059GJob Code: SES.3 Science & Engineering MTS 3 /... ...impact.Job DescriptionWe have multiple openings for Spacecraft Systems Engineers to provide spacecraft subject matter expertise as part...Minimum wageFull timeFor contractorsLocal areaWork from homeRelocationFlexible hours1 day per week
$222.9k - $334.3k
...for you too.About the TeamThe Data Platform and Observability Engineering (DPOE) team is building Workday's next-generation, multi-petabyte... ...on designing, building, and operating complex distributed system architectures, evidenced by successful deployment of systems with...Full timeWork at officeRemote workHome officeFlexible hours$100k - $200k
...diagnose, monitor and manage heart failure, allowing people to restore their health and get on with their lives. The Senior Software Systems Engineer is responsible for supporting the design, development, and testing of complex software systems for medical devices and...For contractorsWorldwideShift work$166k - $343k
Presales Systems Engineer - HPE Networking (Northern California)This role has been designated as ‘Remote/Teleworker’, which means you will primarily work from home.Who We Are:Hewlett Packard Enterprise is the global edge-to-cloud company advancing the way people live and...Full timeWork experience placementLocal areaImmediate startRemote workWork from home- A leading IT staffing company is seeking a Systems Engineer to provide support for Cerner Millennium and Lab applications. The role requires 10+ years of experience and a BA/BS degree. Key responsibilities include performing engineering tasks, system monitoring, and troubleshooting...Remote jobContract work
- ...with a worldwide presence in various end products, manufacturing systems, and industries serving primarily the semiconductor industry.... ...a list of office locations. HOW YOU MAKE AN IMPACT Automation Engineer II has the responsibility and skills to specify, develop, modify,...Full timeWork at officeLocal areaRemote workWorldwideFlexible hours
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