Bioinformatics Software Engineer
Dawar Consulting
Job Description
Our client, a world leader in diagnostics and life sciences, is looking for an "Bioinformatics Software Engineer" based out of South San Francisco, CA. Hybrid Role 2 days onsite Job Duration: Long Term Contract (Possibility Of Further Extension) Pay Rate: $56.40/hr on W2 Company Benefits: Medical, Dental, Vision, Paid Sick leave, 401K Job Description: We are seeking a Bioinformatics Software Engineer to support software systems and data workflows in a Next-Generation Sequencing (NGS) laboratory environment. The role involves developing and maintaining applications and pipelines used for sequencing data processing, laboratory workflow management, and data analysis. The candidate will collaborate with scientists and bioinformaticians to ensure reliable data processing and scalable analysis workflows. Key Responsibilities:
Bioinformatics Pipeline, Python, Bash, NGS
Our client, a world leader in diagnostics and life sciences, is looking for an "Bioinformatics Software Engineer" based out of South San Francisco, CA. Hybrid Role 2 days onsite Job Duration: Long Term Contract (Possibility Of Further Extension) Pay Rate: $56.40/hr on W2 Company Benefits: Medical, Dental, Vision, Paid Sick leave, 401K Job Description: We are seeking a Bioinformatics Software Engineer to support software systems and data workflows in a Next-Generation Sequencing (NGS) laboratory environment. The role involves developing and maintaining applications and pipelines used for sequencing data processing, laboratory workflow management, and data analysis. The candidate will collaborate with scientists and bioinformaticians to ensure reliable data processing and scalable analysis workflows. Key Responsibilities:
- Develop and maintain software applications using Java and Python to support sequencing lab systems.
- Build and support bioinformatics pipelines using Workflow Description Language (WDL) and Cromwell Workflow Engine .
- Write and optimize queries in Oracle Database using SQL/PL-SQL for data processing and integration.
- Develop automation scripts using Bash for data workflows and analysis tasks.
- Integrate laboratory systems such as Laboratory Information Management System (LIMS) with sequencing platforms and analysis pipelines.
- Support pipeline execution in HPC environments and cloud platforms like Amazon Web Services .
- Troubleshoot pipeline performance and maintain documentation and version control using Git .
- Bachelor's or Master's degree in Computer Science, Bioinformatics, Computational Biology, or related field with 3+ years of experience .
- Strong experience with Java, Python, SQL/PL-SQL, and Bash scripting .
- Experience with bioinformatics pipelines, workflow automation, and scientific data systems .
- Knowledge of NGS workflows, HPC environments, and container technologies such as Docker is a plus.
Bioinformatics Pipeline, Python, Bash, NGS
Vacancy posted 1 day ago
Similar jobs that could be interesting for youBased on the Bioinformatics Software Engineer in South San Francisco, CA vacancy
- ...person will play a critical role within the Bioinformatics & Data Science Development team with a strong background in cloud engineering and application development. The... ...be proficient in Python, demonstrate sound software engineering principles, and contribute to...Suggested
Insight Global
South San Francisco, CA4 days ago - A leading consulting firm is seeking a Bioinformatics Software Engineer in South San Francisco. The ideal candidate will develop software applications and bioinformatics pipelines for sequencing labs, utilizing skills in Java, Python, SQL, and Bash scripting. This hybrid...SuggestedLong term contract
- ...and provide budgeting/financial flexibility by offering contingent labor as a variable cost. Job Description Job Title: Bioinformatics Software Engineer Duration: 11+ Months Position Type: Contract Duties: We have a full-time temporary contractor opening (11 months) for...SuggestedFull timeContract workTemporary workFor contractorsWork at officeImmediate start
$150k - $210k
...healthcare, and our roadmap is packed with innovations in bioinformatics, AI, and drug development. We have built a lean, all-star team... ...stage equity. About the Role We are looking for a Senior Software Engineer who will contribute to the design and implementation of our...SuggestedWork experience placementWork at officeRelocationFlexible hours3 days per week$130k - $160k
...operators, and we're backed by top-tier investors. Position Overview: MyOme is looking for a talented and experienced bioinformatics software engineer to join the team. As a Bioinformatics Software Engineer, you will build scalable, cloud-based pipelines that power...SuggestedWork at office2 days per weekMyOme
San Francisco, CA12 days ago- A prominent IT staffing company is seeking a Bioinformatics Software Engineer for a temporary contract role in South San Francisco. The ideal candidate will design and develop API web-services for third-party integrations with AmpliSeq Designer and collaborate with a multi...Temporary work
- ...Open Roles Filter by Location Departments 3D Perception Engineer - Autonomy (Droid) Engineering South San Francisco, California,... ...Engineering South San Francisco, California, USA Autonomy Platform Software Engineer Engineering South San Francisco, California, USA...Remote work
ZipLine
South San Francisco, CA1 day ago - ...Job Title: Senior Full Stack Software Engineer Location: Remote About the Transportation, Logistics, Supply Chain and Storage Company / The Opportunity: Join a pioneering force in the transportation, logistics, supply chain, and storage industry, where innovation...Remote workRelocationFlexible hours
Talently
South San Francisco, CA5 days ago $110k - $270k
...neural processing unit (GPNPU) architecture. Quadric's co-optimized software and hardware is targeted to run neural network (NN) inference... ...C++ DSP and control code. Role The Full-Stack Engineer is key to making the Quadric product and toolchain easily accessible...Work at officeLocal areaImmediate startWorldwideFlexible hoursquadric.io
Burlingame, CA4 days ago- ...AWS Fullstack Software Engineer Location: South Sanfrancisco (Day one Onsite) The AWS Fullstack Software Engineer will be working in the Transportation Fleet Squad and focus on web application and AWS deployments. The Engineer will work closely with the development...
Zortech Solutions
South San Francisco, CA2 days ago $70 - $75 per hour
...C++ (Must have) Android and NDK (Must have) Secondary Skills - Nice to Haves OpenGL and/or Vulkan Unity or Unreal game engine development OpenXR, Oculus VR, or other XR API experience Quality assurance (QA) testing, UI testing, conformance testing...Contract workTemporary workRemote workTEKsystems
Burlingame, CA1 day ago- Join Us in Creating a World with More Living Creating a new way to deliver starts with people who want to make a difference. We know your time is valuable and so are our customers. Build with empathy. Ask thoughtful questions. And imagine a better future. We don'...
ZipLine
South San Francisco, CA4 days ago - ...Software Engineer Specializing in Cybersecurity and Cryptography Xona is the navigational intelligence company bringing real-time, centimeter-level certainty to any device, anywhere on Earth. With Pulsar – the world's most advanced PNT satellite infrastructure in Low...Permanent employment
Xona Space Systems
Burlingame, CA2 days ago - ...Software Engineer (Consultant), gCS Catalysts- Genentech United States The Position: The Computational Catalyst in the Genentech Research & Early Development (gRED) Computational Sciences (gCS) organization is seeking a talented and passionate Software...Local area
My3Tech Inc
South San Francisco, CA1 day ago - ...Sr. Software Engineer Location: South San Francisco, CA (it’s NOT a remote role, it can be 2 days onsite from the beginning) Duration: 6 months (Contract to Hire) Client: Fluidigm Corporation Only US Citizens and GC holders Our client is looking for a Senior...Contract work
My3Tech Inc
South San Francisco, CA2 days ago $142.5k - $264.7k
...Applications for data acquisition, collection, storage, transformation, linkage and sharing. We’re looking for a full-stack software engineer to join our team building modern software solutions for Pathology organizations across Roche. The Opportunity: You will...Local areaWorldwideRelocation package3 days per weekGenentech
South San Francisco, CA5 days ago$142.5k - $264.7k
...for data acquisition, collection, storage, transformation, linkage and sharing. The Opportunity: We are seeking an experienced Software Engineer with a background in drug discovery, ideally in protein sciences or a related area. In this role you will design and develop...Local areaWorldwideRelocation package3 days per weekDisability Solutions
South San Francisco, CA2 hours ago$123k - $216k
...Software Engineer, ASIC South San Francisco, California, United States About Neuralink: We are creating devices that enable a bi-directional interface with the brain. These devices allow us to restore movement to the paralyzed, restore sight to the blind, and...Full timeTemporary workFlexible hoursNeuralink
South San Francisco, CA2 days ago$161.93k - $227.33k
...this opportunity: At Freenome, we are seeking a Senior Software Engineer II to join our innovative Engineering team. The ideal... ...Domain-specific experience in computational biology, genomics, bioinformatics, or a related field. Experience working in an FDA regulated...Work experience placementLocal areaRemote workFreenome
Brisbane, CA9 hours ago$70 per hour
...Sr. Software Engineer Job Title: Business Analyst Location: South San Francisco, California (2 to 3 days at site in a week) Contract Rate: $70/hr BA (Business Analytics) / BSA (Business systems analysts) - Over 13 years of experience working as BA - Worked...Contract workKeylent Inc
South San Francisco, CA2 days ago- ...Job Description A leading biotech company is seeking a Full Stack Engineer with a strong foundation in software engineering. The ideal candidate blends front-end development, interaction design, and software craftsmanship to deliver intuitive, performant, and scalable...
Insight Global
South San Francisco, CA3 days ago $123k - $216k
...Software Engineer, CI/CD Austin, Texas, United States; South San Francisco, California, United States About Neuralink: We are creating devices that enable a bi-directional interface with the brain. These devices allow us to restore movement to the paralyzed, restore...Full timeTemporary workRemote workFlexible hoursNeuralink
South San Francisco, CA2 days ago$60 - $120 per hour
...Micro1 is seeking a Software Developer to help train next-generation AI systems. In this fully remote role, you will apply your expertise to shape how AI models learn and perform through high-quality input. The ideal candidate will have 3+ years of software development...Hourly payRemote workFlexible hoursmicro1
Burlingame, CA2 hours ago$180k - $270k
...record breaking speeds. What You'll Do You'll own high-impact software across one or more parts of Zipline's application platform,... ...AI tooling to increase velocity while maintaining strong engineering rigor Our current stack includes Go, Python, React, gRPC, Kafka...Local areaImmediate startShift workZipline
South San Francisco, CA12 days ago$135k - $175k
...possible with observability and security data. As part of the Engineering Team you will play an important role in bringing Imply Lumi to... ...reshaping the future of data! The Role Imply is looking for a Software Engineer to build the industry's first Observability Warehouse...Remote jobHome officeImply
Burlingame, CA12 days ago$35 per hour
...systems and have a user base spanning from highly technically proficient engineers to non-technical scientists and doctors; but all of them need solid systems, rugged networking, and bullet-proof software to do their jobs. This role will integrate tightly with teams across...Hourly payPrice workFull timeTemporary workInternshipFlexible hoursNeuralink
South San Francisco, CA5 days ago$170k - $240k
...of the past. Our team is a tight-knit group of bold thinkers- engineers, innovators, and industry experts who thrive on turning audacious... ...This role is perfect for someone who loves combining math and software, and is excited about applying their experience to make robots...Full timeLocal areaFlexible hours- ...some of the world’s largest airlines and ground handling providers. For more information, visit We are looking for a Senior Software Engineer to join the Localization team and take ownership of our calibration systems — from robustifying and stabilizing the existing offline...Work experience placement
- A leading logistics technology company in South San Francisco is seeking an experienced software engineer specializing in CI/CD systems. This role involves maintaining and improving the development pipeline while collaborating closely with various software teams. The ideal...
- Kargo is seeking a Software Engineer in South San Francisco, California, with over 5 years of experience. Responsibilities include owning features from design to deployment and collaborating closely with product and engineering teams. Candidates should have experience in...
Do you want to receive more vacancies?
Subscribe and receive similar vacancies to Bioinformatics Software Engineer. Be the first to apply!
Related searches
- software engineer full time South San Francisco, CA
- startup software engineer South San Francisco, CA
- rust software engineer South San Francisco, CA
- software developer South San Francisco, CA
- software development engineer aws South San Francisco, CA
- ngo software engineer South San Francisco, CA
- software engineer South San Francisco, CA
- senior software engineer South San Francisco, CA
- cybersecurity software engineer South San Francisco, CA
- part time software developer remote South San Francisco, CA