Principal Scientist, Mass Spectrometry
$142.5k - $256.5kModernaTX
The Role
Moderna is seeking a highly motivated Principal Scientist Mass Spectrometry to join the Cancer Vaccine and Bioinformatics Research (CVBR) team and support preclinical research.
This role combines significant hands-on laboratory work with scientific and technical leadership cross-functional collaboration and people management responsibilities. The successful candidate will develop and apply peptide-based liquid chromatography-mass spectrometry (LC-MS) proteomics approaches to address complex biological questions advance research programs support cross-functional mass spectrometry priorities within the team and build and strengthen robust scalable analytical capabilities that can be applied across Modernas portfolio.
A key focus of the role will be evolving how peptide-based proteomic data are generated and leveraged by integrating experimentation with automation computational approaches and artificial intelligence/machine learning (AI/ML)-enabled tools to accelerate learning and generate high-quality datasets that can be integrated across experiments and data modalities.
Heres What Youll Do
- Maintain a strong hands-on laboratory presence by designing and executing LC-MS proteomics studies and developing workflows from protein extraction and digestion through peptide separation LC-MS data acquisition and data analysis.
- Use LC-MS-based proteomics to address complex biological questions and partner with research teams to generate insights that inform program decisions.
- Identify scientific and technical risks communicate limitations and develop practical mitigation strategies.
- Manage and develop a small scientific team setting priorities allocating resources and supporting high-quality scientific execution.
- Establish and maintain best practices for data quality reproducibility system performance and experimental controls.
- Serve as a subject matter expert in mass spectrometry and help shape scientific approaches across research programs.
- Mentor colleagues across the broader Mass Spectrometry team and foster a culture of scientific curiosity hypothesis-driven experimentation and continuous improvement.
- Communicate scientific strategies results and recommendations through discussions presentations and reports.
- Evaluate and apply emerging technologies in mass spectrometry automation computation AI/ML and instrumentation to improve capability robustness throughput and scientific insight.
Heres What Youll Bring to the Table (Basic Qualifications)
- Ph.D. in analytical chemistry biochemistry molecular biology immunology or a related discipline.
- At least 5 years of post-Ph.D. experience in mass spectrometry preferably in an industry setting with a demonstrated track record of developing and applying LC-MS-based proteomics approaches to address complex biological questions and advance research programs.
- Deep hands-on expertise in LC-MS analysis of biological samples including protein extraction and digestion peptide cleanup and separation instrument operation LC-MS acquisition method development and data analysis.
- Deep expertise in discovery and quantitative bottom-up proteomics including DDA DIA and targeted acquisition approaches such as PRM.
- Demonstrated ability to troubleshoot complex challenges across sample preparation chromatography instrumentation data acquisition and data analysis.
- Experience leading and developing direct reports including setting priorities providing actionable feedback supporting professional development and ensuring high-quality scientific execution.
- Experience communicating scientific findings analyses and recommendations to internal scientific and cross-functional teams through technical reports presentations and other written or verbal forums.
- Expertise with bioinformatics tools and workflows for mass spectrometry data analysis including FragPipe Spectronaut Skyline or comparable software.
- Demonstrated ability to independently define scientific approaches challenge existing methods and develop or implement novel solutions to complex scientific problems.
Heres What Youll Bring to the Table (Preferred Qualifications)
- Experience with additional mass spectrometry applications including intact protein analysis PTM characterization and alternative fragmentation strategies.
- Experience with immunopeptidomics or other mass spectrometry approaches relevant to infectious disease or oncology.
- Familiarity with Bruker and Thermo Fisher Scientific mass spectrometry platforms.
- Experience using R Python or related programming languages for data analysis and visualization.
- Track record of introducing new mass spectrometry capabilities technologies or workflows into a research environment.
- Experience applying automation computational and AI/ML approaches to transform analytical workflows or enable new scientific capabilities.
- A desire to make an impact as part of a transformational company that is Bold Relentless Curious and Collaborative.
Our Working Model
As we build our company we have always believed that an in-person culture is critical to our success. This role is 100% onsite reflecting the importance of being physically present to support the work collaborate closely with colleagues and contribute to our site-based operations.
Working onsite enables real-time collaboration strong team connections direct mentorship and the hands-on partnership needed to deliver our mission. Join us in shaping a world where every interaction is an opportunity to learn contribute and make a meaningful impact.
Moderna is a smoke-free alcohol-free and drug-free work environment.
Pay & Benefits
At Moderna we believe that when you feel your best you can do your best work. Thats why our benefits and well-being resources are designed to support youat work at home and everywhere in between.
- Competitive healthcare plus voluntary benefit programs to support your unique needs
- A holistic approach to well-being with access to fitness mindfulness and mental health support
- Family planning benefits including fertility adoption and surrogacy support
- Generous paid time off including vacation volunteer days sabbatical global recharge days and a discretionary year-end shutdown
- Savings and investments to help you plan for the future
- Location-specific perks and extras
About Moderna
Since our founding in 2010 we have aspired to build the leading mRNA technology platform the infrastructure to reimagine how medicines are created and delivered and a world-class team. We believe in giving our people a platform to change medicine and an opportunity to change the world.
By living our mission values and mindsets every day our people are the driving force behind our scientific progress and our culture. Together we are creating a culture of belonging and building an organization that cares deeply for our patients our employees the environment and our communities.
We are proud to have been recognized as a Science Magazine Top Biopharma Employer a Fast Company Best Workplace for Innovators and a Great Place to Work in the U.S.
If you want to make a difference and join a team that is changing the future of medicine we invite you to visit to learn more about our current opportunities.
Equal Opportunities
Moderna is committed to equal employment opportunity and non-discrimination for all employees and qualified applicants without regard to a persons race color sex gender identity or expression age religion national origin ancestry or citizenship ethnicity disability military or protected veteran status genetic information sexual orientation marital or familial status or any other personal characteristic protected under applicable is a place where everyone can grow. If you meet the Basic Qualifications for the role and you would be excited to contribute to our mission every day please apply!
Moderna is an E-Verify Employer in the United States. We consider qualified applicants regardless of criminal histories consistent with legal requirements.
Accommodations
Were focused on attracting retaining developing and advancing our employees. By cultivating a workplace that values diverse experiences backgrounds and ideas we create an environment where every employee can contribute their best.
Moderna is committed to offering reasonable accommodations to qualified job applicants with disabilities. Any applicant requiring an accommodation in connection with the hiring process and/or to perform the essential functions of the position for which the applicant has applied should contact the Accommodations team at .
Export Control Notice This position may involve access to technology or data that is subject to U.S. export control laws including the Export Administration Regulations (EAR). As such employment is contingent upon the applicants ability to access export-controlled information in accordance with U.S. law. Due to the nature of the work and regulatory requirements only individuals who qualify as U.S. persons (citizens permanent residents asylees or refugees) are eligible for this position. For this role Moderna is unable to sponsor non-U.S. persons to apply for an export control license.-
Required Experience:
Staff IC
$179k - $236k
...an accomplished DMPK and bioanalytical scientist with experience in PK study design, bioanalytical... ...nonclinical and clinical contexts (e.g. mass spectroscopy, ELISA, NGS, etc.)... ...biotechExperience with LC-MS/MS or related mass spectrometry platformsAbout Alltrna Alltrna is the...Mass spectrometryPrincipal$115k - $215k
...programs through development and application of targeted protein mass spectrometry (MS) assays using state-of-the-art LC-MS systems—including... ...drug discovery:Highly organized, solutions-oriented scientist with the ability to manage multiple priorities simultaneously...Mass spectrometryPrincipal- ...Kymera Therapeutics seeks a Senior or Principal Scientist in Targeted Proteomics to lead mass spectrometry-based assay development and execution supporting targeted protein degradation research programs. The role combines scientific strategy, experimental design, and...Mass spectrometryPrincipal
- ...Principal Scientist position leading bioanalytical strategies for biologics in drug discovery. The role involves managing a team of scientists, developing ligand binding assays and mass spectrometry methods, and collaborating across immunology and oncology programs at...Mass spectrometryPrincipal
$214.1k - $337k
...Merck seeks a Senior Principal Scientist to lead mass spectrometry capabilities within the Quantitative Biosciences group in Boston. The role combines technical expertise in MS-based assay development with strategic leadership, mentorship, and collaboration across discovery...Mass spectrometryPrincipalLocal area- ...Principal Scientist position in pharmacokinetics, dynamics, metabolism and bioanalytics within the R&D Division. The role involves leading... ...lab-based scientists developing ligand binding assays and mass spectrometry-based bioanalytical strategies Contribute to global...Mass spectrometryPrincipal
$214.1k - $337k
Job DescriptionSenior Principal Scientist - Boston, MAOverviewWe are seeking a Senior Principal Scientist to provide scientific and strategic leadership for mass spectrometry-enabled discovery within the Quantitative Biosciences group in Boston. This role will help shape...Mass spectrometryPrincipalFull timeFor contractorsLocal area$108.5k - $201.5k
...potential to transform patients’ lives around the world. As a Principal Scientist I or II, Oligonucleotide Chemistry and Innovation, you... ...performance liquid chromatography and liquid chromatography mass spectrometry.Essential RequirementsDoctor of Philosophy in Chemistry or...Mass spectrometryPrincipalFull timeLocal areaWorldwideFlexible hours$142.5k - $256.5k
The RoleModerna is seeking a highly motivated Principal Scientist, Mass Spectrometry to join the Cancer Vaccine and Bioinformatics Research (CVBR) team and support preclinical research.This role combines significant hands-on laboratory work with scientific and technical...Mass spectrometryPrincipalPermanent employmentFull timeWork from home$176.2k - $277.3k
...Dynamics, Metabolism and Bioanalytics - Principal ScientistOur company is a global... ...thinking and collaborative Principal Scientist (director-level equivalent) to contribute... ...bioanalytical efforts (ligand binding assays and mass spectrometry) for biologics and other modalities...Mass spectrometryPrincipalFull timeFor contractorsLocal areaWorldwideFlexible hours$108.5k - $201.5k
...leader in field of Physical Chemistry Analytics (PCA) and Mass Spectrometry (MS) to join BRC’s Analytics, Bioanalytics and Formulation... ...biotherapeutic modalities.Job DescriptionInternal Job Title: Principal Scientist I/IIPosition Location:Cambridge, MA, onsiteThe Biologics...Mass spectrometryPrincipalFull time$152.6k - $283.4k
...promising discoveries into life-changing medicines. As a Sr Principal Scientist / Associate Director, Biomarker Assay Development... ...chain reaction, next-generation sequencing, immunoassays, and mass spectrometry.Demonstrated ability to lead, develop, and inspire teams within...Mass spectrometryPrincipalFull timeContract workLocal areaFlexible hours$170k - $205k
...Therapeutics is seeking an accomplished, technically driven Sr. Scientist II/ Principal Scientist to join our Chemical Biology team. This is a senior individual-contributor role for a proteomics and mass spectrometry expert who can independently drive chemoproteomic target...Mass spectrometryPrincipal- ...expression and proteomic profiles.Required SkillsA PhD level scientist with postdoctoral research experience in biochemical and... ...biology of disease pathogenesis is required. Prior experience in mass spectrometry-based analytic work is preferred. Please email CV to Weiming...Mass spectrometryFor contractors
- ...Seeking a highly skilled and motivated Scientist\/Sr. Scientist. The successful candidate... ...possess extensive hands-on experience in mass spec-based bioanalysis, protein and peptide... ...of 5+ years of experience in mass spectrometry bioanalytical sciences Extensive experience...Mass spectrometry
- Beacon Hill in Cambridge, MA is seeking a Scientist/Sr. Scientist to support discovery programs with a focus on targeted protein degradation... ...next generation biologic therapeutics. The role emphasizes mass spectrometry bioanalysis, protein/peptide characterization, and...Mass spectrometry
- Zealand Pharma A/S in Cambridge, MA is seeking a Scientist or Senior Scientist in Yeast Surface Display to drive antibody, VHH, and... ...platform at the new research center, collaborating with Mass Spectrometry, Biophysics, and Pharmaceutical Development teams to validate...Mass spectrometry
$124k - $166k
...group at Biogen is seeking an experienced and highly motivated scientist to contribute to the discovery and development of innovative... ...transduction and gene editing technologies.Familiarity with mass spectrometry-based characterization of antibody therapeutics and...Mass spectrometryFull timeTemporary workLocal area- PK Sciences Project Team Representative We are seeking an enthusiastic and motivated PK Sciences project team representative to develop and implement translational or clinical pharmacology strategies to support the pursuit of transformative new medicines through late...Principal
- ...a difference in healthcare through precision and accuracy? We're seeking a talented Medical Technologist II with a knack for Mass Spectrometry to join our dynamic Chemistry Lab team at our world-class medical center in the vibrant city of Boston, MA!About Us: We're at...Mass spectrometry
$138.6k - $257.4k
...Description SummaryWe are seeking a highly motivated and experienced scientist to lead a small group of biologists with advanced imaging... ...for patients.Job DescriptionInternal Job Title: Senior Principal Scientist/Associate DirectorPosition Location: Cambridge, MA,...PrincipalFull time- RESEARCH SCIENTIST 3 , The Zhang Lab - Broad Institute of MIT and Harvard, with expertise in proteomics and peptidomes. This individual... ...LC-MS instruments, troubleshooting workflows, and analyzing mass spectrometry data using platforms such as PEAKS, FragPipe, DIA-NN, and...Mass spectrometry
$31.5 - $41 per hour
...Eurofins seeks a Mass Spectrometry and Proteomics Scientist to support discovery research, LNP formulation development, and bioanalytical activities in Boston. The role involves LC-MS/MS analysis, automated sample processing, assay optimization, and cross-functional collaboration...Mass spectrometryHourly pay- Pace Analytical Services, LLC in Cambridge, MA is seeking a Scientist to perform advanced analytical development with a focus on High-Resolution LC-MS, developing chromatographic and mass spectrometry methods for siRNA formulations and raw materials. The role requires...Mass spectrometryFull time
- Moderna is seeking a Principal Scientist, Mass Spectrometry to lead hands-on LC-MS proteomics within the CVBR team and drive scalable analytical capabilities for preclinical programs. The role blends experimental leadership with cross-functional collaboration, mentoring...Mass spectrometry
- Rangam, Cambridge, MA, seeks a contract Associate Scientist to join the Chemical Biology and Proteomics group within Discovery Sciences... ...will design and execute discovery proteomic screens using mass spectrometry, perform proximity biotinylation studies in cells, generate...Mass spectrometryContract work
$160k - $235k
...Sr. Scientist/Principal Scientist, Translational Research and Clinical Biomarkers (Immunology) Boston, MA Salary Band: $160,000-$235,000 Location: Downtown Boston, MA Position Summary Antares Therapeutics is seeking to add an enthusiastic and highly motivated...Principal$148.5k - $214.5k
Job title: Senior Principal Scientist Type 2 ImmunologyLocation:Cambridge, MAAbout the JobImmunology and Inflammation Therapeutic AreaWe have an exciting opportunity to join Sanofi's Translational Biology team as a Senior Principal Scientist within the Type 2 Immunology...PrincipalFull time- ...LifeScience LLC. in Cambridge, MA is seeking an Associate Proteomics Scientist for a 12-month contract to apply proteomics in drug... ...therapeutic development. The role focuses on cellular profiling, mass spectrometry-based proteomics, and data analysis to understand protein...Mass spectrometryContract work
- ...Bachelor’s Degree or Master’s Degree \n ASCP, AMT or equivalent certification \n Must have extensive experience in chemistry. Mass spectrometry experience preferred. \n Permanent and full time position \n \n Interested in learning more? Contact Andrea at ****@*****.***...Mass spectrometryPermanent employmentFull timeFlexible hoursDay shift
Do you want to receive more vacancies?
Subscribe and receive similar vacancies to Principal Scientist, Mass Spectrometry. Be the first to apply!
- support scientist Cambridge, MA
- senior analytical scientist Cambridge, MA
- decision scientist Cambridge, MA
- senior research scientist Cambridge, MA
- scientist 1 Cambridge, MA
- scientist Cambridge, MA
- research scientist Cambridge, MA
- qc scientist Cambridge, MA
- senior principal scientist Cambridge, MA
- hplc scientist Cambridge, MA




