Sign up to access all features of our service.
  • Job search
  • Favorites
  • Create a CV
    New
  • Salaries
  • Subscriptions

Scientist-Principal Scientist, Protein Design & Structure

Superluminal Medicines Inc.

About Superluminal Medicines:

Superluminal Medicines is a generative biology and chemistry company revolutionizing the speed and accuracy of how small molecule medicines are created. The Company’s platform aims to create candidate‑ready compounds with unprecedented speed using a combination of deep biology, computational and medicinal chemistry, machine learning, and proprietary big data infrastructure. We are expanding the team of talented scientists who seek to build the future of small molecule drug discovery with creativity and innovation.

Position Summary

We are seeking a highly innovative and experienced Scientist / Senior Scientist / Principal Scientist to lead GPCR protein engineering and production efforts. The successful candidate will be a subject matter expert (SME) in membrane protein biochemistry, responsible for developing and implementing strategies to express, purify, and characterize challenging G‑protein coupled receptors (GPCRs) to support structural biology, biophysics, and drug discovery programs. This role involves hands‑on laboratory work and scientific leadership.

Key Responsibilities
  • Protein Engineering Strategy: Design, execute, and optimize constructs for GPCR expression.
  • Expression & Purification: Drive the development of high‑throughput protein expression (mammalian/insect cells) and purification workflows, ensuring high-quality, homogeneous protein for assays and structural studies (Cryo‑EM).
  • Cross‑Functional Collaboration: Partner with pharmacology, structural biology, and medicinal chemistry teams to support drug discovery projects and advance programs from hit‑to‑lead and lead optimization.
  • Technical Leadership: Serve as a SME on GPCR protein sciences in internal and external project teams; evaluate and implement new technologies.
  • Scientific Documentation & Communication: Document experiments in ELN, present data at internal/external meetings, and publish research findings.
Required Qualifications
  • Ph.D. in Biochemistry, Molecular Biology, Biophysics, or a related field with 2+ years (Scientist), 5+ years (Senior Scientist), or 8+ years (Principal Scientist) of relevant experience; or a master’s or bachelor’s degree in a related field with commensurate industry experience.
  • Deep knowledge of GPCR biology and membrane protein structure‑function relationships.
  • Proven expertise in molecular biology (cloning, construct design, mutagenesis).
  • Hands‑on experience in protein purification of GPCRs using FPLC (affinity, SEC).
  • Familiarity with protein stabilization techniques (e.g., antibody fragments, fusion partners, mutagenesis).
  • Excellent communication, interpersonal, and leadership skills.
Preferred Qualifications
  • Experience with structural biology methods (data collection and processing for Cryo‑EM).
  • Experience in laboratory automation in protein sciences & purification.
  • Background in computational protein design tools (e.g., Rosetta, AI/ML‑driven prediction).
Benefits

Superluminal offers a comprehensive benefits package that fully covers employees’ annual deductibles and monthly premiums for medical, dental, and vision insurance. The package also includes a 401(k) match program, a Massachusetts transportation subsidy, equity, unlimited paid time off, and both disability and life insurance.

Equal Opportunity Statement

Superluminal Medicines is an Equal Opportunity Employer committed to a culturally diverse workforce. All qualified applicants will receive consideration for employment without regard to race, color, creed, religion, national origin, age, ancestry, nationality, marital, domestic partnership, or civil union status, sex, gender, gender identity or expression, affectional or sexual orientation, disability, veteran or military status or liability for military status.

#J-18808-Ljbffr
Vacancy posted 2 days ago
Similar jobs that could be interesting for youBased on the Scientist-Principal Scientist, Protein Design & Structure in Boston, MA vacancy
  • $142.5k - $256.5k

     ...This role will lead the design, execution, and...  ...closely with computational protein design teams to ensure...  ...role is intended for a scientist ready to own and...  ...integrates with AI- and structure-guided design across Moderna...  ...consistent with a Principal Scientist role.Here’s... 
    Principal
    Structures
    Permanent employment
    Full time
    Work at office
    Work from home

    Moderna Therapeutics

    Cambridge, MA
    2 days ago
  •  ...expanding the team of talented scientists who seek to build the...  .../Senior Scientist/Principal Scientist to lead GPCR protein engineering and production...  ...receptors (GPCRs) to support structural biology, biophysics, and...  ...Engineering Strategy: Design, execute, and optimize... 
    Principal
    Structures

    Superluminal Medicines, Inc.

    Boston, MA
    3 days ago
  • $142.5k - $256.5k

     ...seeking a talented, experienced, and highly motivated Principal Scientist to support computational protein design across therapeutic research. This role will focus...  ...candidate will bring deep expertise in protein structure, de novo binder design, molecular recognition, and... 
    Principal
    Structures
    Permanent employment
    Full time
    Work at office
    Work from home

    Moderna Therapeutics

    Cambridge, MA
    2 days ago
  •  ...for cancer. Powered by computational protein design and proprietary technologies that yield...  ...is seeking an experienced Principal Scientist to help establish and advance our analytical...  ...and biophysical datasets to establish structure-property relationships and translate... 
    Principal
    Structures
    Full time
    Local area

    Synolo Therapeutics

    Cambridge, MA
    a month ago
  • $208k - $286k

     ...beyond.THE ROLEWe are seeking a Principal Scientist (Embedded ML/Computational)...  ...development (e.g., systems design, drug design, molecular modeling, systems biology, protein design, LLM/agentic...  ...for sequences, graphs, or 3D structures; docking rescoring (e.g., gnina... 
    Principal
    Structures
    Interim role

    Seres Therapeutics

    Cambridge, MA
    1 day ago
  •  ...researchers apply formal analysis techniques to the design and verification of critical software systems,...  ...For more on our culture and organizational structure, visit Life at Galois. About This Role Principal Scientists drive a research agenda and develop R&D... 
    Principal
    Structures
    Local area
    Immediate start

    Galois

    Boston, MA
    4 days ago
  • $144.8k - $217.2k

     ...chemist to join our Computational Drug Design group in Boston. This individual will be...  ...interpersonal skills and the ability to guide scientists in drug discovery.This is a Boston based...  ...experimental decision making.Integrate structural, biological, and ADME/DMPK data to... 
    Principal
    Structures
    Full time
    Summer work
    Remote work
    Flexible hours
    2 days per week
    3 days per week

    Vertex Pharmaceuticals

    Boston, MA
    3 days ago
  • $185k - $240k

     ...serve as a scientific leader in molecular design across our discovery portfolio. As a...  ...medicinal chemists, machine learning scientists, structural biologists, biologists, and chemical...  ...across Antares. The role is offered at the Principal or Senior Principal Scientist level;... 
    Principal
    Structures
    Work at office
    2 days per week
    3 days per week

    Antares Therapeutics

    Boston, MA
    22 days ago
  • $156k - $214k

     ...coatings. You will take on a group of four scientists and grow it as the portfolio expands...  ...data supports active learning and inverse design. The work asks you to stay close to the...  ...production with reliable instrument control, structured data capture, and end-to-end robotics... 
    Principal
    Structures
    Full time
    Work at office
    Local area
    Flexible hours

    Lila Sciences

    Cambridge, MA
    1 day ago
  • $216k - $297k

     ...of talented machine learning scientists innovating on model architectures...  ...-modal, multi-scale model design and ensure the system can...  ...biology, pathway reasoning, protein function, and autonomous discovery...  ..., protein sequence, protein structure, pathways, imaging, pathology... 
    Principal
    Structures

    Seres Therapeutics

    Cambridge, MA
    9 hours ago
  • $142.5k - $256.5k

     ...accomplished and highly motivated Principal Scientist to join the Antibody...  ...and B cell discovery campaign design, antibody screening, sequence...  ...with antigen design, structural and computational biology, Immuno...  ...molecular biology, biochemistry, protein engineering, cancer biology,... 
    Principal
    Structures
    Permanent employment
    Full time
    Work at office
    Work from home

    Moderna Therapeutics

    Cambridge, MA
    3 days ago
  • $119.7k - $222.3k

     .... Our unique organizational structure enables colleagues to work seamlessly...  ..., biologics/therapeutic proteins, antibody drug-conjugates,...  ...PKS insights into study design, data interpretation, and project...  ..., to be considered for Principal Scientist II. 4+ years of experience to... 
    Principal
    Structures
    Full time

    Novartis

    Cambridge, MA
    4 days ago
  • $176.2k - $277.3k

     ...Metabolism and Bioanalytics - Principal ScientistOur company...  ...Principal Scientist (director-level equivalent...  ...molecules, peptides, protein therapeutics) as a project...  ...through strategic design of discovery testing funnels...  ...with structure-activity relationships... 
    Principal
    Structures
    Full time
    For contractors
    Local area
    Worldwide
    Flexible hours

    Merck Sharp & Dohme (MSD)

    Boston, MA
    22 hours ago
  • $168k - $252k

     ...the intersection of Computational Drug Design, project teams, Data & Methods, and Digital...  ...them into scientifically rigorous AI co-scientists that enhance compound design, knowledge...  ...relevant AI and agentic capabilities to protein therapeutics and other emerging... 
    Principal
    Full time
    Summer work
    Remote work
    Flexible hours
    2 days per week
    3 days per week

    Vertex Pharmaceuticals

    Boston, MA
    2 days ago
  • $190.8k - $300.3k

     ...seeking an accomplished and highly motivated Principal Scientist to provide strategic and scientific...  ...portfolios.This role will lead the design, execution, analysis, and communication...  ...approaches based on genomic, transcriptomic, protein-expression, cellular, or other disease-... 
    Principal
    Full time
    For contractors
    Local area
    Flexible hours

    Merck Sharp & Dohme (MSD)

    Boston, MA
    2 days ago
  • $160k - $190k

     ...of modulating intracellular proteins that have historically been beyond...  ...play a central role in the design, development and...  ...discovery of Helicons to inform structure-activity relationships and development...  ...technical advisor to junior scientists, fostering scientific rigor and... 
    Principal
    Structures
    Shift work

    Parabilis Medicines

    Cambridge, MA
    22 days ago
  • $126k - $181.5k

     ...recruiting a team of top-tier scientists to help build it. This is a...  ...strong track record in membrane protein engineering and surface...  ...The successful candidate will design, build, troubleshoot, and test...  ...applying established scaffolds, structures, and methods from literature... 
    Structures

    Seres Therapeutics

    Cambridge, MA
    1 day ago
  • $180k - $258.5k

     ...pioneering the emerging field of Protein Editing. At Expedition...  ...molecules that edit protein structure and function to unlock presently...  ...Learning (ML) to enable generative design. Expedition Medicines is...  ...motivated and innovative (Senior) Scientist, Machine Learning to join our... 
    Structures

    Seres Therapeutics

    Cambridge, MA
    4 days ago
  • $119.7k - $222.3k

     .... Our unique organizational structure enables colleagues to work seamlessly...  ..., biologics/therapeutic proteins, antibody drug-conjugates,...  ...PKS insights into study design, data interpretation, and project...  ..., to be considered for Principal Scientist II. 4+ years of experience to... 
    Principal
    Structures

    Research

    Cambridge, MA
    more than 2 months ago
  • $230.09k - $254.31k

     ...to delivering on the promise of targeted protein degradation science to create a new...  ...leveraging its TORPEDO® platform to efficiently design and optimize small-molecule medicines to...  ...and evaluate the work of external scientists and suppliers, including vendor identification... 
    Principal
    Full time
    Contract work

    C4 Therapeutics Inc

    Watertown, MA
    1 day ago
  • AbbVie in Cambridge, MA is seeking a Senior Scientist I in Exploratory Target Generation within Protein Sciences at the CRC site. You will help shape early program design for Immunology/Neuroscience, expressing complex proteins and antigens to support exploratory studies... 

    Allergan

    Cambridge, MA
    1 day ago
  • $110k - $160k

     ...them most. Raven’s experienced scientists, operators, and healthcare...  ...potential: a single gene or protein with meaningful biological effects...  ...group. This individual will design and execute in vitro assays...  ...combines deep knowledge of antibody structure and function with hands-on... 
    Structures
    Full time
    Shift work

    RA Capital Management, LLC

    Boston, MA
    4 days ago
  • $150k - $170k

     ...The company integrates deep protein engineering expertise with artificial...  ...mRNA tolerizing therapies designed to selectively expand...  ...Medicines is seeking a Deep Learning Scientist II to join the Artificial...  ...spanning protein language models, structural modeling, and multi-modal... 
    Structures
    Full time
    Temporary work
    Work experience placement
    Flexible hours

    Repertoire Immune Medicines

    Watertown, MA
    1 day ago
  • $146k - $236k

     ...reproducible methodology Communicate translational results in Flagship-internal forums and, where appropriate, external ones Deliver structured retrospectives on engagements (scientific outcome, decision informed, value created, collaborator feedback) Qualifications... 
    Principal
    Structures

    Seres Therapeutics

    Cambridge, MA
    2 days ago
  • $170k - $200k

     .... The role requires practical experience designing and synthesizing complex molecules, peptides and peptidomimetics; applying structure-activity relationship principles to improve...  ...with a talented and passionate team of scientists Be a part of a cutting-edge company that... 
    Principal
    Structures

    Psivant Therapeutics

    Watertown, MA
    1 day ago
  • $192k - $265k

    Senior Machine Learning Scientist I/II, Model-Driven Optimization Somerville...  ...to join our Model-Driven Design team. This role will focus on...  ...of machine learning, protein design, engineering, and experimental...  ..., with the ability to bring structure to open-ended problems and... 
    Structures
    Work at office
    Shift work

    Generate Biomedicines

    Somerville, MA
    3 days ago
  • $138k - $207k

     ...seeking a highly experienced and motivated Principal Scientist to join the Vertex Manufacturing...  ...mentorship, technical coaching, and structured training to junior scientists, associates...  ..., 401(k) and so much more.Flex Designation:On-Site DesignatedFlex Eligibility Status... 
    Principal
    Structures
    Full time
    Summer work
    Flexible hours

    Vertex Pharmaceuticals

    Boston, MA
    2 days ago
  • $142.5k - $256.5k

     ...the front end of microbial production: designing, building, screening, and selecting host...  ...expression-screening workflows for recombinant proteins, enzymes, plasmids, or related...  ...a 70/30 work model. This 70% in-office structure helps to foster a culture rich in innovation... 
    Principal
    Structures
    Permanent employment
    Full time
    Work at office
    Work from home

    Moderna Therapeutics

    Norwood, MA
    2 days ago
  • $108.5k - $201.5k

     ...transform patients’ lives around the world. As a Principal Scientist I or II, Oligonucleotide Chemistry and...  ...chemically modified oligonucleotides and conjugates.Design and optimize novel oligonucleotide chemistries through structure-activity relationship studies.Develop and... 
    Principal
    Structures
    Full time
    Local area
    Worldwide
    Flexible hours

    Novartis

    Cambridge, MA
    9 hours ago
  •  ...Biology, or a related field with a focus on protein discovery/mapping. Proficiency in...  ...understanding of molecular biology and structure-function relationships. Experience with...  ...HMMER, Pfam, PDB, KEGG). Experience with designing, building, and maintaining SQL databases... 
    Structures

    Biosens8

    Cambridge, MA
    6 days ago

Do you want to receive more vacancies?

Subscribe and receive similar vacancies to Scientist-Principal Scientist, Protein Design & Structure. Be the first to apply!