Principal System Architect - Instrument
Cytek Biosciences
At Cytek Biosciences , we're transforming the future of flow cytometry. As a global leader in spectral technology, our advanced platforms enable deeper scientific discovery, empowering researchers in academic, clinical, and biopharma labs to accelerate their breakthroughs with unmatched precision and efficiency.
We're growing fast-and we're looking for passionate, driven individuals to grow with us. If you're ready to make an impact in a cutting-edge biotech company, this is your opportunity.
We are seeking an experienced Principal System Architect - Instrument to define and guide the architecture of next-generation flow cytometry platforms. This role is responsible for translating customer, application, and business needs into robust instrument designs, with particular focus on subsystem architecture, system reliability, and cross-functional execution with global teams and suppliers, including partners in China. This role is ideal for a professional who has worked with Class I, II, or III devices (including 510(k) cleared products) and thrives in environments undergoing cGMP and design control maturation.
Key Responsibilities:
- Own the end-to-end system architecture for flow cytometry instruments, ensuring strong integration of fluidics, optics, electronics, software, and serviceability requirements.
- Define system requirements, interface specifications, and performance budgets to balance performance, reliability, manufacturability, cost, and scalability.
- Lead architecture decisions for fluidics subsystems, including sample handling, sheath flow, flow cell design, clog resistance, and contamination control.
- Drive reliability engineering activities, including failure mode analysis, reliability risk assessment, root cause analysis, corrective actions, and long-term robustness improvements.
- Establish and track system-level reliability goals such as uptime, MTBF, failure rates, maintenance intervals, and field performance metrics.
- Collaborate closely with R&D, quality, manufacturing, service, and NPI teams to ensure design choices support product reliability and lifecycle performance.
- Work directly with internal teams and suppliers in China to align on technical requirements, resolve issues, support qualification, and drive on-time execution.
- Participate in supplier development, design reviews, risk mitigation, and technical issue resolution with global and China-based partners.
- Guide subsystem teams through integration, verification, and validation activities, ensuring robust performance under real-world use conditions.
- Support design for manufacturability, serviceability, and supply chain resilience.
- Provide technical leadership and mentorship across engineering teams.
Qualifications:
- Ph.D. or M.S. in Mechanical Engineering, Bioengineering, Physics, or related field.
- 8+ years of experience developing complex analytical, diagnostic, or life science instrumentation.
- Demonstrated experience in system architecture and cross-functional technical leadership.
- Strong understanding of fluidics systems, including flow control, microfluidics, particle transport, and contamination mitigation.
- Experience with reliability engineering methods such as FMEA, fault tree analysis, root cause analysis, and reliability growth.
- Strong troubleshooting skills and a bias toward root cause resolution and preventive action.
- Direct experience with Class I, II, or III medical devices, including 510(k) cleared products
- Experience operating in or helping build a cGMP-compliant environment
- Ability to translate customer and product needs into clear engineering requirements and trade-offs.
- Strong communicator who can teach, coach, and influence without formal authority
- Hands-on problem solver who enjoys working on the production floor as well as in documentation systems
- Ability to travel internationally (up to 20%) to support global manufacturing and cross-site collaboration
Preferred Experience
- Direct experience with flow cytometer fluidics subsystems or closely related technologies such as hematology analyzers, cell sorters, or microfluidic diagnostic systems.
- Experience in designing for high reliability, field performance, and serviceability in regulated instruments.
- Familiarity with optical detection systems, fluorescence, and signal acquisition.
- Professional working proficiency in Mandarin Chinese
- Hands-on experience coordinating with China- and APAC-based engineering and operations teams.
- Experience working with suppliers, contract manufacturers, or development partners in China.
- Experience in regulated environments such as ISO 13485 and FDA design controls.
- Proficiency with modeling, simulation, or data analysis tools such as CFD, MATLAB, or Python.
PHYSICAL DEMANDS AND WORK ENVIRONMENT:
The physical demands described here are representative of those that an employee must meet to perform the essential functions of this job successfully. Reasonable accommodations may be made to enable individuals with disabilities to perform essential functions.
- Prolonged periods of sitting and standing
Why Join Cytek?
Innovative Culture
Be part of a team that champions creativity, teamwork, and scientific excellence. Cytek thrives on collaboration, customer focus, and an entrepreneurial spirit grounded in integrity and shared success.
Meaningful Impact
Contribute directly to a biotech pioneer- TIME Recognizes Cytek Biosciences as One of America's Growth Leaders of 2026.
Growth & Development
Cytek invests heavily in employee training and development-fostering career progression and innovation. Employees are encouraged to stretch their skills, and growth opportunities are built into the company's DNA.
Comprehensive Benefits & Equity
Enjoy competitive compensation, a full package of benefits, and a workplace committed to inclusion and ethical practices. Cytek welcomes diverse backgrounds, identities, and experiences, ensuring all team members are supported and respected.
Cytek is an equal-opportunity employer. All qualified applicants will receive consideration for employment without regard to race, color, age, religion, sex, gender identity, sexual orientation, national origin, genetic information, disability status, veteran status, or any other characteristic protected by law.
$195k - $220k
...to build and deploy million-qubit, fault-tolerant quantum systems. Quantum computers harness the laws of quantum... ...clearpathto make it real. Come join us. Job Summary: Principal Power Systems Architect, Quantum Infrastructure will serve as the critical interface...PrincipalFull timeShift work- ...Title: Principal / Lead Wireless Communications System Architect Location: US, Europe Job Type: Full-Time / Consultant Industry: Wireless Communications, Software-Defined Radio (SDR), Semiconductor IP and Advanced SoC About the Company: Omni...PrincipalFull time
- ...and analytics supporting these. As a Sr. Principal, Lifecycle Program Lead, you will be... ...transformative improvements in enterprise Instrument Replacement capabilities, defining and scaling... ...experience and loyalty; Identify systemic bottlenecks and improvement opportunities...PrincipalLocal areaWorldwide
$105 - $115 per hour
...Solution Architect (Principal Enterprise Architecture- Product-to-Market) Contract (1 Year + Possible extension) San Francisco, CA or Pleasanton, CA (Onsite) Pay Rate -$105-115 an hour on W2 (DOE) Key Responsibilities: Assess the current P2M (Product-to...PrincipalContract workLocal area$150k - $170k
...is seeking a Mechanical Engineer in Fremont, California, to manage mechanical reliability projects and develop advanced biotech instrumentation. Candidates should have 6+ years of experience in mechanical engineering related to biotech devices. Key responsibilities...Suggested- Alamar Biosciences, Inc. is seeking a Senior Mechanical Engineer to enhance and develop their biotech instrument platform. Located in Fremont, California, the position offers a salary range of $150,000 to $170,000, along with bonuses and equity. Candidates should have...
- ...Systems Engineer (Contract) Overview EVONA Space is seeking an experienced Systems Engineer to lead technical delivery across customer programs while contributing to internal product development. This role sits at the intersection of spacecraft systems engineering...Contract work
- ...startup developing the autonomy software and operating systems powering many of the leading automotive, trucking, defense... ...globally. They're looking to hire strong Systems Architects at a senior to principal level to help build and own the middleware and software...
$180k - $280k
A leading technology firm is seeking a Senior Principal Hardware Development Engineer to contribute to the design and validation of advanced... ...role demands extensive experience in optical architecture and system performance. Candidates should possess a Bachelor's in...Principal$150k - $200k
Systems Architect for High-Performance Systems We are seeking a highly skilled and experienced System Architect to develop the cutting edge next‑generation hardware systems tailored for high‑performance computing (HPC) and artificial intelligence (AI) workloads. This role...Flexible hours$150k - $170k
A biotechnology company is seeking a Principal Engineer for Manufacturing Sciences and Technology to lead technical efforts in CAR-T production. The role requires a Bachelor's degree in Science or Engineering and over 8 years of GMP pharmaceutical manufacturing experience...Principal$180k - $280k
...supercomputing. About the Role Molex is seeking a very experienced Senior Principal Hardware Development Engineer as a senior member of our... ...optical transceiver architecture, component integration, and system-level performance, with a strong emphasis on innovation,...PrincipalFlexible hours$125k - $165k
...Travelling Personal Assistant / Valet for UHNW British Principal Travelling Personal Assistant / Valet needed for High Net Worth British Principal - He is a kind Principal with an extremely busy travel schedule. This role is for someone who an travel at a moments notice...PrincipalDaily paidSummer work$250k - $350k
...companies operate. About the Role A senior hands-on leadership position at the forefront of AI innovation. You'll architect AI systems, lead a team of top engineers, and drive technical strategy across the company's core AI initiatives, from prototype to production...PrincipalFlexible hours$175k - $195k
Velo3D, Inc. in Fremont, CA is looking for a Staff / Principal Electrical Manufacturing Engineer to enhance production quality and reliability. You'll design electrical systems, manage projects, and support manufacturing while ensuring compliance with high standards. The...Principal- ...research-focused, global, and centered on roles that shape product direction, market position, and company value. Role Overview – Principal Christian & Timbers is hiring a Principal to lead complex searches and support business development within its AI and...PrincipalWorldwide
- ...who can lead—not just manage—and who brings a wealth of "big pharma" clinical experience to the table. The Role As our Principal Scientific Data Scientist, you will ensure our data is world-class, rigorous, and ready to train the AI models that will discover...PrincipalFor contractors
- ...mitigation plans to prevent product failures. Assess field risks associated w/ new product platforms, components, assembly challenges, and system architectures to define, prioritize, track, and validate reliability improvements throughout the NPI process Develop new...PrincipalWork at office
- ...office, regular shift), contract role in Fremont, CA OR Livermore, CA. We are hiring a Principal Power Electronics Engineer to help drive next-generation power delivery systems for advanced semiconductor equipment. This is a high-impact role at the intersection of new...PrincipalContract workWork at officeShift work3 days per week
- ...transistor-level circuit design, physical silicon characterization, and system-level architecture. You will be responsible for the design... ...Responsibilities: Mixed-Signal Hardware Architecture: Architect, model, and design Reconceive’s analog MAC IP. Champion...Principal
- ...PhD with 3 years experience. Skills Strong analog circuit design skills required Strong understanding of circuit theory, linear system theory, feedback, ICs, and high-speed signal fundamentals required Strong laboratory measurement skills required Experience with...PrincipalFull timeWork at office
$38.75 - $53.27 per hour
Bio-Rad Laboratories is seeking a Mechanical Systems Technician in Pleasanton, CA, to support the development of complex life science instruments. The role involves prototyping, testing, and collaboration with a multidisciplinary team. Qualified candidates should have...Hourly pay- ...Principal Substrate and Packaging Engineer Fully onsite in the San Francisco Bay Area Full time opportunity $400-500K total compensation package- base, bonus, stock (depends on skillset/experience level) Industry leader in semiconductor design focused on advanced...PrincipalFull time
- ...We are seeking a Strategic Data Solutions Architect to help enterprise organizations modernize their data ecosystems and build AI-ready... ...Certified Technical Architect (CTA) Salesforce Application or System Architect Certifications CDMP or other Data Governance...Work at office2 days per week1 day per week
- ...cutting-edge technology company in Pleasanton, California seeks an experienced engineer to develop electronic solutions for quantum instruments. The role involves collaboration with multidisciplinary teams, overseeing PCB design, and addressing intricate challenges in a...
$280k - $350k
...PRINCIPAL SOFTWARE ENGINEER BAY AREA, CA (3 DAYS IN OFFICE) $280,000 – $350,000+ (BASE + EQUITY) An exciting opportunity for a hands... ...using internal datasets Develop marketing and growth systems: email delivery, personalization, engagement tracking Create...PrincipalWork at office- ...ensure the global supply chain has access to the Flash memory it needs to keep our world moving forward. Job Description A System Architect focusing on advanced memory technology and AI Inference solution infrastructure will lead the definition of system level...PrincipalTemporary workRemote workFlexible hoursShift work
$260k - $300k
...Principal Flight Systems Engineer San Francisco, California $260,000 – $300,000 + Equity + Full Benefits Package An innovative aerospace company based in San Francisco is seeking an experienced Principal Flight Systems Engineer to support the development of...PrincipalRelocation packageFlexible hours- ...roadmap to anticipate and address industry-defining challenges. Architect and Lead Breakthroughs: Lead the end-to-end lifecycle of... ...TensorFlow) Experience translating research ideas into production systems. Preferred Qualifications: Deep NLP & Domain-Adapted...PrincipalFlexible hours
- ...Principal Machine Learning Engineer In this role, you are responsible for the design, development, programming methods, processes and systems to consolidate and analyze unstructured, diverse "big data" sources to generate actionable insights and solutions for businesses...PrincipalMinimum wage
Do you want to receive more vacancies?
Subscribe and receive similar vacancies to Principal System Architect - Instrument. Be the first to apply!
- technical architect Fremont, CA
- pega system architect Fremont, CA
- system architect Fremont, CA
- principal Fremont, CA
- senior principal cloud computing engineer Fremont, CA
- senior principal scientist Fremont, CA
- salesforce technical architect
- junior system architect
- technical architect
- servicenow technical architect


