Senior Scientist, Oligonucleotide
Scorpion Therapeutics
Position Summary Senior Oligonucleotide Scientist (non-viral delivery technical development team). Technical lead for design, synthesis, purification, and analysis of modified oligonucleotides; drive chemical modifications and scale-up process development from discovery through clinical development. Responsibilities Lead automated solid-phase synthesis of complex, highly modified oligonucleotides at various scales. Develop/optimize purification using preparative RP-HPLC, IEX, SEC, plus TFF and lyophilization. Oversee/perform structural elucidation and purity assessments using LC-MS, MALDI-TOF, NMR, and capillary electrophoresis. Optimize synthetic routes and cleavage/deprotection methods to improve yields and reduce impurities. Evaluate/implement novel chemical modifications and conjugation/delivery strategies (e.g., GalNAc, lipids, peptides) to enhance stability and potency. Serve as oligochemistry lead on multidisciplinary teams. Supervise/mentor/train junior chemists and technicians; maintain lab notebooks, write SOPs, support regulatory filings. Manage inventory of testing articles and critical reagents/phosphoramidites. Analyze and communicate results via experimental reports and meetings. Minimum Qualifications Ph.D. (Organic/Medicinal or related) with 4.5–8+ years, incl. 2+ years industrial biopharma/biotech OR non-PhD with 12–15 years progressive experience. Expertise in phosphoramidite chemistry, protecting groups, and nucleotide modifications (e.g., 2'-OMe, 2'-F, phosphorothioates, locked nucleic acids). Hands‑on automated oligonucleotide synthesis (e.g., ÄKTA Oligopilot, Mermade) and preparative purification. Strong troubleshooting and interpretation of LC-MS for complex macromolecules. ICH and cGMP familiarity (highly desirable). Preferred Qualifications Strong problem‑solving; thrive in fast‑paced, matrixed environment. Excellent written/verbal communication. Proven project leadership and collaboration. Compensation & Benefits Base pay range: $145,000–$155,000+ bonus, equity and benefits. On‑site (manufacturing/lab‑based role). #J-18808-Ljbffr Scorpion Therapeutics
- ## Senior Scientist, OligonucleotideApplyremote type: Site Basedlocations: South Boston, MAtime type: Full timeposted on: Posted 6 Days... ...Summary**We are seeking a highly skilled and motivated Senior Oligonucleotide Scientist to join our non-viral delivery (NVD) technical...Senior
$112k - $140k
Sarepta Therapeutics in Cambridge, MA, is looking for a talented scientist to join its RNA research group. This position involves conducting novel oligonucleotide synthesis and characterization while collaborating with various teams to advance RNA therapeutics. The ideal...Senior$126k - $181.5k
Flagship Pioneering is seeking a Senior Scientist in Conjugation Biochemistry to lead bioconjugation projects in a dynamic research team... ...years of industrial experience in designing and validating oligonucleotide conjugates. This role involves designing, synthesizing, and...Senior$145k - $155k
CRISPR Therapeutics is looking for a Senior Oligonucleotide Scientist to drive innovation in oligonucleotide synthesis and analysis. The role involves leading complex synthesis projects and mentoring junior scientists while developing processes for scalable oligonucleotide...Senior$145k - $155k
Scorpion Therapeutics is looking for a Senior Oligonucleotide Scientist in Boston, MA. The role involves leading oligonucleotide synthesis and supporting chemical modifications throughout clinical development. Qualified candidates will have a Ph.D. in Organic/Medicinal...Senior$145k - $155k
CRISPR Therapeutics in Boston is seeking a Senior Scientist specializing in oligonucleotide synthesis to lead technical development projects. The role involves innovative contributions to chemical modifications and process optimizations, aiming to enhance therapeutic candidates...Senior$126k - $234k
...Principal Scientist II / Senior Principal Scientist – Hybrid (Cambridge, MA) Novartis is a leader in neuroscience and cardiovascular disease... .... We are seeking a translational modeler to accelerate oligonucleotide therapeutics (xRNA), including antibody‑xRNA conjugates, from...Senior$126k - $234k
...directly. Summary #LI-Hybrid Internal Title: Principal Scientist II or Senior Principal Scientist Location: Cambridge, MA... ...are seeking a translational modeler eager to accelerate oligonucleotide therapeutics (xRNA), including antibody-xRNA conjugates,...Senior$112.3k - $168.46k
...Senior Scientist, Delivery (Lipid/Polymer) Chemist Introduction to role Are you ready to design next‑generation lipids that unlock the... ...foundational understanding of new therapeutic modalities, such as oligonucleotides, RNA, DNA, peptides, and proteins. Communication: Excellent...SeniorTemporary workImmediate start- Senior Scientist, Bioanalytical Sciences (Cambridge, MA) The client is seeking an experienced Senior Scientist to join their Bioanalytical... ...acid bioanalysis using RT‑qPCR for quantifying mRNA or oligonucleotides in preclinical or clinical settings Experience developing...Senior
$45k
...access to the entire drug discovery community from academic scientists, small and medium biotech, to the largest biopharma. At Alloy... ...in LC–MS to lead bioanalytical characterization of oligonucleotide therapeutics, focusing on DMPK and biological interpretation...SeniorApprenticeshipWork at officeImmediate startFlexible hours$126k - $181.5k
Senior Scientist, Conjugation Biochemistry Cambridge, MA USA Job Description: We are seeking an experienced and motivated Senior Scientist... ...areas. Design, synthesis, purification and analysis of oligonucleotide‑conjugates on antibodies and other modalities. Develop and...SeniorFlexible hours- ...übingen, Germany. JOB DESCRIPTION: AIRNA is seeking a highly motivated Senior Scientist in Toxicology to help drive the pre-clinical safety strategy for the successful development of oligonucleotide programs across all stages of development. Reporting to the Head of Preclinical...Senior
- Job Description AbbVie is looking for a Senior Scientist I in the siRNA group within the Biotherapeutics and Genetic Medicine department... ...approaches to address key scientific challenges related to oligonucleotide therapeutics. Responsibilities Lead research efforts...SeniorTemporary work
- ...A leading healthcare institution in Boston seeks a Sr. Principal Scientist to oversee operations in a GMP lab, focusing on the production and quality control of radiopharmaceuticals. The ideal candidate will have extensive experience in aseptic operations, knowledge of...Senior
- ...A global biopharmaceutical company is seeking a Senior Principal Scientist to lead drug discovery efforts in muscle biology. The position emphasizes supervising junior scientists, managing projects, and advancing translational research. Candidates should possess a PhD...SeniorWork at officeRemote work
$80k - $120k
...Sciences is seeking a highly motivated and scientifically driven Senior Scientist, LC-HRMS to join our Bioanalytical Sciences team. Reporting... ...modalities, including small molecules, peptides, oligonucleotides, lipids, and other emerging technologies. This individual...SeniorFull timeLocal areaMonday to Friday$103.5k - $115k
...chromatography of biologics/RNA (AKTA or similar; scaled down, automated systems). 1 year synthesis/purification of long guide oligonucleotide RNA. 3 years high-throughput/automation development, programming, and execution (Tecan/Hamilton/Lynx or similar). 4 years analytical...Senior$112k - $140k
...Therapeutics is seeking a talented, motivated, and experienced scientist to join the discovery chemistry team located in Bedford, MA. The successful candidate will work on our PMO & siRNA oligonucleotide platform and discovery research on improved delivery of oligonucleotides...Senior$109k - $130k
Senior Associate Scientist - In Vivo Pharmacology We are seeking a highly motivated Senior Associate Scientist to join our In Vivo Pharmacology... ...-routine experiments to determine the efficacy of novel oligonucleotides in rodent models across a range of disease indications....SeniorWork at officeFlexible hours- AIRNA Corporation, Inc. in Cambridge, MA is looking for a Senior Scientist in Toxicology to lead the pre-clinical safety strategy for oligonucleotide programs. This role involves scientific leadership in toxicology and safety pharmacology, reporting to the Head of Preclinical...Senior
$96.01k - $116.34k
...Kendall Square is seeking a highly skilled and motivated Senior Associate Scientist with strong expertise in analytical method development... ...Experience with LNP drug products, antibodies, and RNA/oligonucleotide analysis preferred. Ability to manage multiple projects...SeniorHourly payFull timeTemporary workPart timeSummer workLive inRemote workFlexible hoursShift work$96.01k - $116.34k
## Senior Associate Scientist, LC/LC-MSCambridge - MA - USFind out how well you match with this job**Working with Us** Challenging. Meaningful... ...Experience with LNP drug products, antibodies, and RNA/oligonucleotide analysis preferred.* Ability to manage multiple projects...SeniorHourly payFull timeTemporary workPart timeFor contractorsSummer workLive inWork at officeLocal areaRemote workFlexible hoursShift work$67.6k - $101.4k
...Switzerland GmbH in Cambridge, MA is seeking a talented Associate Scientist II to join our RNA synthesis group. The successful candidate... ...by performing synthesis, purification, and analysis of oligonucleotides. This onsite position requires a chemistry background and...$63 - $65 per hour
...quantification with ELISA and Western Experience in oligonucleotide therapeutics is a plus Position Overview: Seeking a Contract Scientist to support the siRNA group within the... ...with excellent communication skills. Seniority level Seniority level Mid-Senior level Employment...Contract workTemporary workPart time- Eacademy Sanofi is seeking a Senior Principal Scientist I in Cambridge, MA, to lead a team developing functional biomarkers and immunophenotyping panels. The role requires a Ph.D. and extensive experience in flow cytometry, assay design, and managing teams. This position...Senior
- Sanofi is seeking a Senior Principal Scientist I - Functional Biomarkers to lead a team in Cambridge, MA. This role involves developing and implementing complex biomarker assays and ensuring compliance with regulatory standards. The ideal candidate will have a Ph.D. and...Senior
- Sanofi is seeking a Senior Principal Scientist I in Cambridge, MA to lead innovative research in functional biomarkers. You will guide teams to develop complex immunophenotyping assays and ensure compliance with industry standards. A Ph.D. with extensive experience in...Senior
- Sanofi is seeking a Senior Principal Scientist I in Cambridge, MA to lead projects in Translational Disease Biology. This role demands deep disease expertise and aims to drive innovations in drug development through collaboration across various functions. The successful...Senior
$94.94k - $113k
Twist Bioscience is hiring a Sr Research Associate for their Upstream Antibody Discovery team in Quincy, MA. The role focuses on supporting cell culture, hybridoma, and single B cell antibody techniques to discover various antibody candidates. Qualified candidates should...Senior
Do you want to receive more vacancies?
Subscribe and receive similar vacancies to Senior Scientist, Oligonucleotide. Be the first to apply!
- support scientist Boston, MA
- analytical scientist Boston, MA
- safety scientist Boston, MA
- hplc scientist Boston, MA
- drug safety scientist Boston, MA
- research scientist - biology Boston, MA
- nurse scientist Boston, MA
- senior principal scientist Boston, MA
- water quality scientist Boston, MA
- qc scientist Boston, MA

