Principal Scientist, Scientific Workflows & Agentic Cheminformatics
$117k - $201.25kJohnson & Johnson Innovation Center
Johnson & Johnson seeks a Principal Scientist to lead the development of agent-enabled scientific workflows in cheminformatics and drug discovery. The role involves designing, prototyping, and validating agentic approaches that integrate data, models, and expert knowledge to accelerate discovery across multiple therapeutic areas.
Responsibilities
- Build partnerships with medicinal chemists and scientists to identify high-impact opportunities for agentic workflows
- Design and prioritize a portfolio of scientific questions where agentic approaches can improve discovery quality or speed
- Develop and validate agentic prototypes in realistic discovery settings, combining expertise with data, models, and computational tools
- Evaluate agent behavior for scientific validity, reproducibility, uncertainty quantification, and robustness across scenarios
- Drive adoption of agentic capabilities by integrating them into familiar scientific environments and establishing human-agent collaboration patterns
Requirements
- PhD or equivalent substantial experience in cheminformatics, computational chemistry, medicinal chemistry, or related discipline
- Deep understanding of compound design, predictive models, and discovery decision-making
- Strong Python programming skills and experience developing automated workflows and scientific applications
- Familiarity with workflow orchestration and sound software development practices
- Ability to build partnerships across medicinal chemistry, CADD, biology, DMPK, and data science teams
- Experience designing scientifically meaningful use cases and establishing rigorous evaluation criteria
$168k - $252k
...an accomplished Senior Principal Scientist with proven record of... ...testing and deploying scientific computational methods and agentic AI systems for drug discovery... ...enhance scientific workflows, improve decision-... ...computational methods and cheminformatics expert, you will...PrincipalScientificFull timeSummer workRemote workFlexible hours2 days per week3 days per week$168k - $252k
...DescriptionVertex is seeking a scientific leader to accelerate... ...of AI and agentic systems across drug discovery... ...chemistry, cheminformatics, and AI-driven drug discovery... ...rigorous AI co-scientists that enhance compound... ...AI-enabled scientific workflows. Success will be measured...PrincipalScientificFull timeSummer workRemote workFlexible hours2 days per week3 days per week$168k - $252k
...Pharmaceuticals seeks a Senior Principal Scientist to develop and deploy agentic AI systems for drug... ...computational expertise with scientific leadership to create AI-enabled workflows that enhance small... ...discovery, requiring strong cheminformatics and software engineering...PrincipalScientific$168k - $252k
...Pharmaceuticals seeks a senior scientific leader to advance... ...intelligence and agentic systems in small-... ...to develop AI-enabled workflows that enhance molecular... ...develop and deploy AI co-scientists supporting design,... ...chemistry and cheminformatics to small-molecule drug...PrincipalScientific$208k - $286k
...THE ROLE We are seeking a Principal Scientist (Embedded ML/... ...-o, systems biology, and scientific literature mining, ensuring... ...use LLM-based agents and agentic workflows as the connective tissue... .../mass spec, multi-omics, cheminformatics/docking/ADMET, biophysics...PrincipalScientific$137k - $215.27k
...Purpose: We are seeking a skilled cheminformatic scientist to join Takeda’s cheminformatics... ...Accountabilities: Develop and apply agentic AI solutions for drug discovery,... ...autonomous or human-in-the-loop workflows that integrate scientific reasoning, molecular design, data...ScientificMinimum wageLocal area$160k - $224k
...is seeking an accomplished Principal Scientist to lead Target Binding efforts... ...individual will provide scientific and strategic leadership for... ..., machine-learning, and agentic approaches to improve experimental... ..., data-processing workflows, and troubleshooting strategies...PrincipalScientificShift work$216k - $297k
...AI systems that unify human scientific expertise, machine intelligence... ...talented machine learning scientists innovating on model... ...benchmarking, refinement, and agentic integration.Guide technical... ...function, and autonomous discovery workflows.Translate biology into model...PrincipalScientific$179k - $236k
...computational biologists, machine learning scientists, experimental biologists, chemists,... ...AI agent development for Cellarity's scientific use cases. What experiences will... ...work (incl. coding assistants, LLMs, and agentic workflows), while maintaining high scientific...PrincipalScientificFull timeShift work$188k - $257.5k
...software systems that integrate agentic AI with scientific reasoning to accelerate... .... We are seeking a Principal Software Engineer to own the... ...agent, multi-model scientific workflows run reliably. This is a... ...shoulder-to-shoulder with AI scientists, engineers, and domain...PrincipalScientific$108.5k - $201.5k
Description:Mariana Oncology is seeking a Principal Scientist I, Medicinal Chemistry to join our... ...radiopharmaceutical discovery programs.Provide scientific leadership and operational oversight... ...problem-solving efforts, improving workflows, and advising project teams on...PrincipalScientific$138.6k - $257.4k
...highly motivated and experienced scientist to lead a small group of... ...Job Title: Senior Principal Scientist/Associate DirectorPosition... ...Director, you will provide scientific leadership at the intersection... ...novel assays and integrated workflows leveraging imaging, spatial...PrincipalScientificFull time$115k - $215k
...seen, and heard.How you’ll make an impact:Scientific Leadership and Experimental Strategy:... ...new targeted proteomics analysis workflows, including automated enrichment strategies... ...discovery:Highly organized, solutions-oriented scientist with the ability to manage multiple...PrincipalScientific- ...Principal Scientist Our mission at Asimov is to advance humanity's ability to design living... ...line development. This role is for a scientific innovator and a manager of junior scientists... ...to improve expression systems and workflows through innovation and implementation...PrincipalScientific
- ...an accomplished and highly collaborative scientist to lead the Cellular Biology function. The ideal candidate will bring deep scientific and technical expertise in bone marrow biology... ...managing GLP‑and/or cGMP‑compliant workflows. Experience establishing new laboratory capabilities...PrincipalScientific
$108.5k - $201.5k
...a highly curious, hands-on scientist to help build the next generation... ...closely with and provide scientific guidance to junior... ...DescriptionInternal Job Title: Principal Scientist IPosition Location... ...progression.Fluency with AI-enabled workflows in research settingAbility...PrincipalScientificFull timeTraineeship$146k - $236k
...improve the AI platform. The successful candidate will reduce the scientific uncertainty behind Flagship’s drug development and investment... ...to close comprehension and trust gaps associated with complex agentic work products. Responsibilities Translational Prediction &...PrincipalScientific$114.1k - $211.9k
...Description Summary#LI-OnsiteInternal Title: Principal Scientist ILocation: Cambridge, MAWe are seeking a highly motivated and scientifically driven Principal Scientist I to join the... ...staining platforms, digital pathology workflows, and image analysis technologies.Job...PrincipalScientificFull time$108.5k - $201.5k
...Job Description Summary As a Principal Scientist, you will lead and execute formulation development... ...of more than 10 associates, driving scientific excellence while fostering a culture... ...understanding of early‑stage development workflows Experience designing and executing...PrincipalScientific$142.5k - $256.5k
...an accomplished and highly motivated Principal Scientist to join the Antibody Discovery team within... ...concepts and advances them from early scientific idea through First-in-Human studies.... ...antibody generation and optimization workflows, including immunizations, B cell discovery...PrincipalScientificPermanent employmentFull timeWork from home$142.5k - $256.5k
...RoleModerna is seeking a highly motivated Principal Scientist, Mass Spectrometry to join the Cancer... ...hands-on laboratory work with scientific and technical leadership, cross-functional... ...-MS proteomics studies and developing workflows from protein extraction and digestion...PrincipalScientificPermanent employmentFull timeWork from home$108.5k - $201.5k
...patients’ lives around the world. As a Principal Scientist I or II, Oligonucleotide Chemistry and... ...’ xRNA therapeutic platform, bringing scientific creativity, technical expertise, and... ...Mentor scientists and enhance laboratory workflows to improve efficiency, quality, and...PrincipalScientificFull timeLocal areaWorldwideFlexible hours$188k - $259k
About This Role Biogen is seeking a Sr. Principal Scientist, Oral Drug Product Development to provide scientific and strategic leadership for the development of small... ...and advancing new technologies and workflows that strengthen Biogen’s oral drug product development...PrincipalScientificFull timeTemporary workLocal area$144.8k - $217.2k
...approaches including molecular modeling, cheminformatics, data science, and AI-enabled methods.... ...skills and the ability to guide scientists in drug discovery.This is a Boston based... ...of drug candidates.Provide strategic scientific leadership across multiple discovery programs...PrincipalScientificFull timeSummer workRemote workFlexible hours2 days per week3 days per week$108.5k - $201.5k
...modalities.Job DescriptionInternal Job Title: Principal Scientist I/IIPosition Location:Cambridge, MA,... ...experience as a people manager Strong scientific background in analysis of recombinant... ...requiredExperience with data analysis workflows and report generationProven ability to...PrincipalScientificFull time$142.5k - $256.5k
...This role is intended for a scientist ready to own and evolve a core... ...capability, led by scientific judgment and execution, and... ...or AI-driven protein design workflows. ~ Scientific independence... ...ownership consistent with a Principal Scientist role. Here'...PrincipalScientificPermanent employmentWork at officeWork from home$138.6k - $257.4k
...Research is seeking an accomplished Imaging Scientist to join the Image Analysis team in Cambridge.This role is for a scientific and technical leader with expertise in... ...candidate will develop and support scalable workflows for whole-slide pathology and multiplexed tissue...PrincipalScientificFull time- ...holistic and integrative perspective of the ADME/clinical pharmacology properties of candidates and drugs. Collaborates effectively with broader, cross disciplinary project teams to ensure PKS strategies are well integrated into project plans and scientific discussions....PrincipalScientific
$166.77k - $202.09k
...Bristol Myers Squibb seeks a Principal Scientist to lead computational design of small molecules... ...multiple parameters, and providing scientific leadership within a... ..., and deploy predictive models and cheminformatics workflows for routine decision-making Integrate...PrincipalScientific$175k - $225k
...and on LinkedIn.Summary of Position:Scholar Rock is seeking an accomplished and highly collaborative Principal Scientist, Biomarker Development, to provide scientific leadership for biomarker strategy and execution across preclinical programs in neuromuscular disease....PrincipalScientificFull time
Do you want to receive more vacancies?
Subscribe and receive similar vacancies to Principal Scientist, Scientific Workflows & Agentic Cheminformatics. Be the first to apply!
- drug safety scientist Cambridge, MA
- materials scientist Cambridge, MA
- scientist antibody discovery Cambridge, MA
- senior scientist Cambridge, MA
- scientist biology Cambridge, MA
- manufacturing scientist Cambridge, MA
- cell culture scientist Cambridge, MA
- water quality scientist Cambridge, MA
- lead scientist Cambridge, MA
- lab scientist Cambridge, MA



